发布者：pcrarray专业PCR芯片网 时间：2017-12-22 浏览量：1262
|
Virus |
Gene target |
Primer name |
Primer sequence |
Variants' coverage |
|
HIV-1
|
gag |
NP3 |
ATAATCCACCTATCCCAGTAGGAGAAAT |
partial group M |
|
|
NP4 |
TTTGGTCCTTGTCTTATGTCCAGAATG |
|
|
|
pol |
NP51 |
GCAGCATAGAACAAAAATAGAGGAGC |
partial group M |
|
|
|
NP52 |
GGGTAAATCTGACTTGCCCAATTC |
|
|
|
pol |
NP170 |
GARACCAARAATGATAGGRGGAATTG |
group M |
|
|
|
NP171 |
CCAATTATGTTGACAGGKGTRGG |
|
|
|
pol |
NP175 |
GRGAAAGAATARTAGACATAATAGC |
group M |
|
|
|
NP174 |
CTACYGCCCCTTYACCTTTCC |
|
|
|
HIV-2
|
gag |
NP84 |
GTAGACCAACAGCACCACCTAG |
HIV-2/SIV |
|
|
NP85 |
CTGGCACTACTTCTGCCCCG |
|
|
|
gag |
NP86 |
GGGCAGAACAAACAGACCCAGC |
HIV-2 |
|
|
|
NP87 |
GGCAGGCGGTTAGCATCTCTTC |
|
|
|
env |
NP76 |
CTCGCCTCTTGAYCGGRCTATAC |
HIV-2 |
|
|
|
NP77 |
CCCGCAAGAGTCTCTCTCGTAG |
|
|
|
HTLV-1
|
env |
NP88 |
CTCCTCCCCCTGTCATAACTC |
HTLV-1 Sub.A/C |
|
|
NP89 |
GAGACAAGCCAGACYGCCAC |
|
|
|
env |
NP47 |
GRTTACCGGCYCCATGTCCC |
HTLV-1 Sub.A |
|
|
|
NP48 |
CRGCACTGTTCTTGTAATGCTTTGC |
|
|
|
pol |
NP90 |
GCRRCAGGCCCTGTCACAG |
HTLV-1 Sub.A/C |
|
|
|
NP91 |
GTGGTGCCAGTGAGGGTYAGC |
|
|
|
HTLV-2
|
pol |
NP63 |
CGGCCTTACCAATCAGCGGTG |
HTLV-2 Sub.A |
|
|
NP64 |
GRGTTCGCTGGCGTCTGGTC |
|
|
|
env |
NP65 |
CTCCATYCCAACCCTYCCCTTG |
HTLV-2 Sub.A |
|
|
|
NP66 |
GCRCGGCGGCGTCTTGTCG |
|
|
|
pol |
NP67 |
GGCATCCTCATTCACCACATGGG |
HTLV-2 Sub.A/B |
|
|
|
NP68 |
CAGGGGGCCGTGTCAAGCAC |
|
|
|
HBV
|
S gene |
NP11 |
GTRTCTGCGGCGTTTTATCA |
Gen.A-H excl.some D |
|
|
NP97 |
GACAMACGGGCAACATACC |
|
|
|
Core |
NP94 |
GACCACCAAATGCCCCTATC |
Gen.A-H |
|
|
|
NP100 |
ATTGAGATCTTCTGCGACGCGG |
|
|
|
S gene |
NP11-m |
GTDTCTGCGGCGTTTTATCA |
Gen.A-H |
|
|
|
NP97-m |
GACANACGGGCAACATACC |
|
|
|
HCV
|
5'UTR |
NP13 |
CAGAAAGCGTCTAGCCATGGCGT |
Most of Gene.1-6 |
|
|
NP14 |
ACTCGCAAGCACCCTATCAGGCA |
|
|
|
5'UTR |
NP13-m |
CRGAAAGCGYCTAGCCATGGCGT |
Gene.1-6 |
|
|
|
NP14 |
ACTCGCAAGCACCCTATCAGGCA |
|
|
|
WNV
|
E protein |
NP21 |
TCAGCGATCTCTCCACCAAAG |
WNV |
|
|
NP22 |
GGGTCAGCACGTTTGTCATTG |
|
|
|
NS5 |
NP176 |
CCCCTACATGCCGAAAGTCATAGA |
WNV |
|
|
|
NP177 |
CACCCAATACATCTCGTGCGTGG |
|
|
|
NS5 |
NP178 |
TGAAGACCACTGGCTTGGAAG |
WNV |
|
|
|
NP179 |
CCAGCCTGCTGTGTCATCAG |
|
|
|
VACV
|
HA* |
NP102 |
GGACAATCTGACCATCCATYGC |
VACV |
|
|
NP103 |
CCTCGTCTTCTTCTACATCARCC |
|
|
|
ORFA9L* |
NP104 |
CGGATCCAAATGCTGTCTGYG |
VACV |
|
|
|
NP105 |
GGMATTYACTTCGTATAGCGG |
|
|
|
Human
|
β-globin |
NP23 |
ACACAACTGTGTTCACTAGC |
humam/private |
|
|
NP24 |
CAACTTCATCCACGTTTCACC |
|