发布者：Primerbank 时间：2018-01-30 浏览量：1870
|
primer name |
sequence |
Nicotiana |
Arabidopsis |
Populus |
Oryza |
Eucalyptus |
Acorus |
Atropa |
Marchantia |
Spinacia |
Pinus |
Oenothera 2 |
Zea 2 |
Medicago 2 |
|
NTCP4-f |
TTGGATTAGATTTGTAGTTCCA |
4692 |
|
|
|
|
|
|
56328 |
|
|
|
|
65963 |
|
NTCP32-r |
TCAAGCAAAGTTATCTCAAC |
74122 |
|
|
|
|
|
74356 |
|
|
|
|
|
|
|
NTCP34-r |
CTGTTTCTAGTGGGGTATTTGA |
83160 |
|
|
|
|
|
83406 |
|
|
|
|
|
|
|
NTCP37-f |
TTCCGAGGTGTGAAGTGG |
109856 |
108191 |
|
98771 |
113080 |
107232 |
110153 |
|
105191 |
|
113913 |
102617 |
20228 |
|
psbA-5'-2 |
TACGTTCRTGCATAACTTCC |
|
|
|
|
648 |
0 |
|
|
20288 |
119681 |
426 |
|
123493 |
|
5'trnG2S 2 |
TTTTACCACTAAACTATACCCGC |
|
|
|
|
9834 |
9193 |
|
42057 |
|
42035 |
57579 |
13991 |
71471 |
|
5'trnG2G 2 |
GCGGGTATAGTTTAGTGGTAAAA |
|
|
|
|
9812 |
9171 |
|
42035 |
|
29392 |
57601 |
14013 |
71449 |
|
NTCP38-f |
AATTTCGAGGTTCTTATTTACT |
127389 |
|
|
|
88633 |
111940 |
128078 |
|
|
|
60784 |
|
0 |
|
NTCP38-r |
GATTCTGAGCTCTATTCATTAG |
127541 |
|
|
|
0 |
65814 |
128230 |
|
|
|
71678 |
|
0 |
|
NTCP3-f |
AAGTCAAAAGAGCGATTAG |
3902 |
3819 |
|
3441 |
3990 |
3777 |
3859 |
|
3547 |
|
3637 |
3452 |
120132 |
|
rps16-F |
GTGGTAGAAAGCAACGTGCGACTT |
6186 |
6163 |
|
5528 |
6215 |
6038 |
6113 |
|
5781 |
|
134578 |
5579 |
0 |
|
5'rpoC1 exon |
GGTCTTCCTAGYTAYATHGC |
|
|
|
85345 |
|
|
|
|
|
|
|
25093 |
|
|
NTCP2-f |
CTCGCCTACTTACATTCC |
83 |
|
|
|
|
|
84 |
|
|
|
|
|
|
|
NTCP4-r |
ATCCACTTCATTTATCACAATG |
4536 |
|
|
|
|
|
4513 |
|
|
|
|
|
|
|
NTCP5-f |
CGAATTGATAGATACGAAACC |
6881 |
|
|
|
0 |
48612 |
6824 |
|
|
|
0 |
|
0 |
|
atpB Hodges |
GTGGAAACCCCGGGACGAGAAGTAGT |
56737 |
|
|
53270 |
|
|
56393 |
|
52999 |
|
|
|
|
|
rpS16-F Shaw |
AAACGATGTGGTARAAAGCAAC |
6193 |
6170 |
|
5535 |
6222 |
0 |
6120 |
|
5788 |
|
6032 |
5586 |
0 |
|
rps16-4547F |
AGGGGCTCAACCTACAGGAACT |
5175 |
|
|
4568 |
5188 |
5062 |
5140 |
55535 |
4755 |
|
0 |
4568 |
0 |
|
matK-5-PSI-F |
CTATGGCTCCAATTCTGGT |
|
110946 |
|
3692 |
|
4001 |
|
|
|
|
|
|
|
|
rpl2-20ff |
AAAGGTCGTAATGCCAGAGGAAT |
154507 |
152920 |
|
132568 |
90442 |
85557 |
155181 |
|
149807 |
|
90941 |
84300 |
39999 |
|
matK-59R |
GCATAAATATAYTCCYGAAARATAAGTGG |
3570 |
|
|
|
3648 |
0 |
3509 |
|
3212 |
4079 |
0 |
3127 |
0 |
|
rps16 R Downie |
AAACGATGTGGNAGNAARCA |
6193 |
6170 |
|
5535 |
6222 |
0 |
6120 |
|
5788 |
|
0 |
5586 |
0 |
|
psbAr2-2 |
CTTCTTCCTAGCTGCTTGGCCTGT |
|
|
|
|
835 |
710 |
|
|
114690 |
|
613 |
335 |
123306 |
|
NTCP23-f |
CAAAGGAACATTATCAATCATC |
48457 |
|
|
|
50084 |
0 |
48120 |
|
|
|
125542 |
|
0 |
|
NTCP40-rr |
GATGTAGCCAAGTGGATCA |
|
|
|
134064 |
76 |
84079 |
|
|
|
119062 |
78 |
82804 |
123957 |
|
rps16-5' |
CAAGTCGCACGTTGCTTTCTACCACATCGTTT |
6162 |
6139 |
|
5504 |
6191 |
6014 |
6089 |
|
5757 |
|
6001 |
5555 |
0 |
|
NTCP14-r |
CCGATGCATGTAATGGAATC |
31730 |
|
|
|
|
|
31506 |
|
|
|
|
|
|
|
NTCP15-f |
TGCAAAAATCCTACTCTTC |
32662 |
|
|
|
|
|
32458 |
|
|
|
|
|
|
|
NTCP16-f |
TCTAAACTAAAATAATCGAAAGA |
32565 |
|
|
|
0 |
114359 |
32343 |
|
|
|
0 |
65824 |
109784 |
|
rpl14-r (B) |
ATCTGCAGCATTTAAAAGGGTCTGAGGTTGAACAT |
83511 |
|
|
77592 |
0 |
80771 |
83754 |
76586 |
79569 |
|
0 |
79374 |
0 |
|
NTCP20-f |
TCCTCGTAAGACTGAGAGAAAT |
46079 |
|
|
|
|
|
45850 |
|
|
|
|
|
|
|
NTCP21-f |
AAAAAGATCCCACAAAGAAAA |
46311 |
|
|
|
48191 |
8706 |
46077 |
|
|
|
18323 |
|
0 |
|
NTCP21-r |
GTCAAAGCAAAGAACGATT |
47007 |
|
|
|
|
|
46675 |
|
|
|
|
|
|
|
NTCP30-r |
TGCCGGAGAGTTCTTAACAATA |
73106 |
|
|
|
0 |
38483 |
73349 |
|
|
|
27119 |
39809 |
101427 |
|
NTCP22-r |
GTCAAAGCAAAGAACGATT |
47007 |
|
|
|
|
|
46675 |
|
|
|
|
|
|
|
NTCP2-r |
AAGGAGAGGTTATTTTCTTG |
376 |
|
|
10945 |
0 |
0 |
|
|
|
|
0 |
11131 |
109217 |
|
NTCP24-f |
GACCGATGATTTGGACGAC |
56685 |
|
|
|
|
55813 |
56349 |
|
|
|
|
|
|
|
NTCP24-r |
GCTAGCGGACATTTATTTTGAA |
56849 |
|
|
|
0 |
32491 |
56505 |
|
|
|
0 |
47186 |
0 |
|
NTCP25-f |
TTAGTCAGGTATTTCCATTTC |
57326 |
|
|
|
2838 |
2624 |
56982 |
|
|
|
0 |
|
0 |
|
NTCP26-r |
TTTATGTTCGGTGGAAATCACA |
62307 |
|
|
|
|
|
61971 |
|
|
|
|
|
47869 |
|
NTCP27-f |
ATAAATACAGAACCCGTCGTAA |
69322 |
|
|
|
1505 |
1380 |
69570 |
|
|
|
1283 |
|
122636 |
|
NTCP27-r |
TGCTTAGAGTTGGACACAGAAT |
69487 |
|
|
|
|
|
69734 |
|
|
|
|
|
|
|
NTCP28-f |
TCCAATGGCTTTGGCTA |
71526 |
68973 |
|
66819 |
73787 |
68797 |
71784 |
|
67680 |
31104 |
74991 |
68732 |
57583 |
|
NTCP28-r |
AGAAACGAAGGAACCCAC |
71695 |
|
|
|
|
|
71951 |
|
67857 |
|
75160 |
|
|
|
NTCP29-r |
AAAGCCCTTTCGTTAGAAGTAA |
73777 |
|
|
|
|
|
74016 |
|
|
|
|
|
|
|
NTCP5-r |
AATACACCAAACAACAAATCC |
6732 |
|
|
|
129659 |
0 |
6679 |
|
|
|
14927 |
|
5189 |
|
NTCP22-f |
TATCAGAAAAAGAAAAAGAAGG |
46876 |
|
|
|
33873 |
3989 |
46550 |
|
|
|
128551 |
47672 |
80825 |
|
psbC-B47R |
GTCATTTTRTTYCKATCTTTCC |
35951 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps16 F Downie |
CCTGTAGGYTGNGCNCCYTT |
5158 |
|
|
|
|
|
|
|
|
|
|
|
|
|
psaB 5 |
ACRCCRAAGAGTCCTGAC |
40655 |
|
|
|
|
|
40403 |
|
37721 |
76658 |
|
|
|
|
psaB 8 |
TGC TAT GAA TGC ATA AGC |
40123 |
|
|
37887 |
0 |
38912 |
39871 |
|
|
77190 |
0 |
40238 |
37441 |
|
IRB10R |
TAACATATTCTTCCATGGAGCTAAGG |
95874 |
93492 |
|
|
98180 |
92711 |
96140 |
|
90847 |
|
98732 |
87182 |
0 |
|
psbB-65F |
TGCCTACTTTTTTTGAAACATTTCC |
76028 |
|
|
|
|
|
|
|
|
|
|
|
|
|
psbB-B60F |
CATACAGCTCTRGTTKCTGGTTGG |
75028 |
|
|
|
0 |
72279 |
75258 |
|
71122 |
52499 |
0 |
|
53823 |
|
psbB-B61F |
CGGGTMTTTGGAGTTAYGARGG |
75215 |
|
|
|
|
|
|
|
|
|
|
|
|
|
psbB-M1 |
AAGTAYCCCTGATCCCAYTGRTAACGAG |
75791 |
73209 |
|
69637 |
78045 |
0 |
76021 |
|
71885 |
53262 |
78179 |
71544 |
53060 |
|
psbC2r |
AGC ACT AAA GCT TGG ACA GG |
35819 |
|
|
|
|
|
|
|
|
|
|
|
|
|
RPL22 Goulding |
ACTCTTCGTGCTTTGTCAGC |
86274 |
|
|
|
88577 |
|
86521 |
|
|
|
|
|
|
|
psbC-B47F |
GGAAAGATMGRAAYAAAATGAC |
35930 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rpl2-20f |
AAAGGTCGTAATGCCAGAGGAAT |
88119 |
85729 |
|
82550 |
90442 |
85557 |
88376 |
|
83638 |
65177 |
90941 |
84300 |
39999 |
|
psbC-B51R |
TACGAAGAAGAARAATCCTAGAAC |
36795 |
35036 |
|
11225 |
38317 |
35644 |
36550 |
|
33832 |
80247 |
30115 |
11408 |
98400 |
|
psbD-42F |
TAATAGGTTTYATGYTACGTCAAT |
34837 |
|
|
|
|
|
|
|
|
|
|
|
|
|
psbJ-58R |
GATGAACCYAATCCRGAATAYGAAC |
66370 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rpl16-r |
AACCAGATTTCGTAAACAAC |
84058 |
81579 |
|
78122 |
86376 |
0 |
|
77133 |
|
61434 |
86696 |
79912 |
0 |
|
psbT-69F |
TCGCTATCTTYTTYCGAGAACCRC |
76735 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rbcL F259R |
TCTCCAACAACACGCTCGAT |
57872 |
|
|
54693 |
88495 |
|
57525 |
|
54423 |
|
|
|
|
|
rbcL H201F |
CAACTGTATGGACCGATGG |
57794 |
55157 |
|
|
59317 |
56999 |
57447 |
|
54024 |
44274 |
8547 |
|
117908 |
|
rbcL Heinze f |
TGTGTAMAAGCWCGTAATGAAGG |
58873 |
|
|
|
|
|
58526 |
57633 |
|
43195 |
|
|
118901 |
|
rbcL K32F |
TTGGATTCAAAGCTGGTGTT |
57626 |
54989 |
|
54126 |
59149 |
56745 |
57279 |
56386 |
53856 |
44442 |
8715 |
56905 |
117654 |
|
rbcL Z234 |
CGTTACAAAGGGCGATGCTACCGCATCGAG |
57829 |
55192 |
|
54329 |
0 |
56948 |
57482 |
|
54059 |
44239 |
44753 |
57108 |
0 |
|
psbC-50F |
CTCAAGCATTTACTTTTYTAGTTAGAGA |
36413 |
34654 |
|
10843 |
37935 |
35262 |
36168 |
|
33450 |
|
30497 |
11026 |
98018 |
|
ORF315 |
GGTCAATCTTTTAGGAATAGGGTTAC |
117225 |
115394 |
|
106144 |
120611 |
115205 |
117913 |
|
113228 |
104976 |
119791 |
4743 |
4743 |
|
NTCP15-r |
TCTTTCGATTATTTTAGTTTAGA |
32543 |
|
|
|
0 |
114340 |
32321 |
|
|
|
0 |
65805 |
109765 |
|
rpoC2-rc1F |
AAGAGAACGTTGTTTTGGGGG |
17393 |
16977 |
|
|
132181 |
16900 |
17170 |
|
|
|
49478 |
|
0 |
|
NTCP6-r |
GATTCTTTCGCATCTCGATTC |
7262 |
|
|
|
0 |
64913 |
7208 |
|
|
|
0 |
24912 |
0 |
|
NTCP7-f |
TGATCCCGGACGTAATCC |
8475 |
7660 |
|
7685 |
8697 |
8008 |
8395 |
23030 |
|
7773 |
58843 |
|
70788 |
|
rpoC2-r2 |
GATCAGCTAAGCCTTATTTGGC |
18026 |
|
|
28406 |
18848 |
0 |
17803 |
|
16174 |
17029 |
48848 |
30701 |
0 |
|
rpl23rr |
GGAAGTCGATGACTATTCATAG |
154259 |
152672 |
|
|
90696 |
85805 |
154933 |
|
149565 |
|
91189 |
5684 |
39786 |
|
rpoC2 Tsumura |
TGTACACGCGGTAGAAAAAT |
21061 |
19799 |
|
24996 |
0 |
20547 |
20829 |
|
19161 |
|
105735 |
27252 |
83192 |
|
rpoC1-r1 |
TTAGATAGTCCTTTGTGGCTCCG |
21740 |
20502 |
|
24276 |
22584 |
21245 |
21508 |
62893 |
19833 |
|
45135 |
26533 |
83900 |
|
rpoC1-f5 |
CTG GTA ATA RRC ACA AAA CCA TCC |
22724 |
|
|
23289 |
0 |
22232 |
22492 |
|
20816 |
|
0 |
25543 |
0 |
|
psaB 10 |
GATACAATCSGCTCATGG |
39823 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ORF2280-r Katayama |
TGAAACCTTGGCATAsATCT |
128833 |
126681 |
|
|
132326 |
|
129528 |
|
124426 |
|
|
|
|
|
rps15-r |
AAATTTTGGGAAAACGTCAACGAC |
125387 |
123405 |
|
100990 |
0 |
123090 |
126027 |
|
121195 |
|
0 |
104865 |
0 |
|
ORF62-M |
TTGGTTTTGGGTCTGCGAC |
37809 |
|
|
|
|
|
37548 |
|
|
|
|
|
|
|
rpoC1-f2 |
AAATGGGATCCCCAATAGCCGGAG |
21950 |
|
|
24063 |
22797 |
0 |
21718 |
|
|
|
44931 |
|
84113 |
|
rpoC1-f1 |
CCTAAAGATTCATAGTGAACTTC |
21649 |
20411 |
|
24367 |
22493 |
21154 |
21417 |
64298 |
19742 |
37081 |
0 |
26624 |
83809 |
|
rpoB-f3 |
GATCAATGAACCTMCAAAATCC |
27437 |
|
|
|
|
26959 |
27194 |
|
25534 |
|
|
|
|
|
rpl32 |
GAAGTGCGTTTTTTTGGAACTGCC |
115086 |
|
|
|
|
|
|
|
|
|
|
|
|
|
petA-r0 |
CATAHYCYTGYTGBGCRAAAATDGG |
64467 |
|
|
|
|
|
|
|
|
|
|
|
|
|
petB-f (BD-B) |
CTATCGTCCRACCGTTACWGAGGCT |
78375 |
|
|
|
|
|
|
|
|
|
|
|
|
|
psaB (PSAB3) |
AGTGCGTAAACCGATTG |
40816 |
39187 |
|
|
|
|
40564 |
|
37882 |
|
|
|
102549 |
|
rpl23r |
GGAAGTCGATGACTATTCATAG |
88367 |
85977 |
|
|
90696 |
85805 |
88624 |
|
83880 |
4775 |
91189 |
5684 |
39786 |
|
psaB (PSAB4) |
TACAATCCGTTTACGCAC |
40834 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ORF2280-f Katayama |
TATTGATATGAAGATTGCCG |
127325 |
|
|
|
|
|
|
|
|
|
|
|
|
|
atpB 3' 1460R Rydin |
TTAATAGCCTTCGCGGTAG |
55312 |
|
|
|
0 |
54432 |
54968 |
|
|
46600 |
10886 |
|
0 |
|
rps16R Saltonstall |
CCTTGAAAAYGGTGCTCAACC |
|
|
|
4577 |
5201 |
0 |
|
|
4764 |
|
0 |
4581 |
0 |
|
ORF542 Saltonstall |
TTCTACAACGATCGCAAACCC |
|
|
|
2880 |
0 |
0 |
|
|
|
|
0 |
2892 |
0 |
|
atpF2-r1 |
CTATTGAACAACTCGAAAAAGCTCG |
12537 |
|
|
33789 |
0 |
0 |
12305 |
|
|
|
17011 |
36151 |
0 |