发布者：Primerbank 时间：2018-01-30 浏览量：1665
|
primer name |
sequence |
Nicotiana |
Arabidopsis |
Populus |
Oryza |
Eucalyptus |
Acorus |
Atropa |
Marchantia |
Spinacia |
Pinus |
Oenothera 2 |
Zea 2 |
Medicago 2 |
|
rbcL Provan R |
TATTGAATTAACTAATTCATTTCC |
|
|
|
53446 |
115777 |
0 |
|
|
|
|
117696 |
56240 |
0 |
|
atpB Provan F |
GATTGGTTCTCATAATTATCAC |
|
|
|
53298 |
68656 |
122148 |
|
|
|
|
0 |
56102 |
11878 |
|
atpH Provan R |
GAAGCAGCAGCAATTAGTGG |
|
|
|
32064 |
0 |
0 |
|
|
|
|
0 |
34406 |
0 |
|
NTCP18-r |
CCACCTAGCCAAGCCAGA |
37057 |
|
|
|
|
|
36809 |
|
|
|
|
|
|
|
atpE-r |
GAAGGAAGGAGACAAAAAATTGAGGC |
54966 |
|
|
|
0 |
70976 |
54622 |
|
51228 |
|
0 |
|
115043 |
|
ccSSR-23 F |
AYGGRGGTGGTGAAGGGAG |
86877 |
84471 |
|
|
89204 |
84314 |
87136 |
|
83062 |
|
89705 |
83063 |
41271 |
|
atpE-f (r*) |
GCCTCAATTTTTTGTCTCCTTCCTTC |
54941 |
|
|
|
0 |
71001 |
54597 |
|
51203 |
|
0 |
|
115018 |
|
psbD Saltonstall |
CTATGGGGTCACARCCSAGG |
|
|
|
8755 |
0 |
0 |
|
|
|
|
0 |
8933 |
0 |
|
rps2 Provan R |
AATATCTTCTTGTCATTTTTTCC |
|
|
|
29555 |
17734 |
110095 |
|
|
|
|
49934 |
31873 |
94678 |
|
rpoC2 Provan F |
TTATTTATTTCAAGCTATTTCGG |
|
|
|
29429 |
125425 |
0 |
|
|
|
|
28965 |
31757 |
0 |
|
trnET-F |
GTATGTACATGTATMAATSAARTKAA |
32916 |
|
|
|
|
|
32713 |
|
|
|
|
|
|
|
psbK Provan F |
GGAAAAAYKGGTAATCTATTCC |
|
|
|
7559 |
0 |
0 |
|
|
|
|
0 |
7724 |
0 |
|
trnC-r |
CGACACCCRGATTYGAACTGG |
28861 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps3-r1 |
TTGGATATTTCTAGACGAGG |
85266 |
0 |
|
0 |
|
76198 |
85513 |
0 |
124817 |
0 |
|
|
42918 |
|
trnK Provan F |
ATACAGTCTCTTTATCAATATACTG |
|
|
|
3446 |
3997 |
0 |
|
|
|
|
3641 |
|
120127 |
|
ycf10-r1 |
TTCCACCAATYNDTAAHCCAA |
63533 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps16-R2 |
TCGGGATCGAACATCAATTGCAAC |
5271 |
5243 |
|
4666 |
5288 |
5162 |
5236 |
|
4851 |
|
5108 |
4668 |
0 |
|
ccmp1f |
CAGGTAAACTTCTCAACGGA |
3767 |
|
|
|
|
|
3724 |
|
|
|
|
|
|
|
ycf10-f2 |
CKKKTYTTGTTTCNAYHTTKCCAG |
63987 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ycf10-f1 |
AATCTTGGGTTACCAATTGGTGG |
63509 |
|
|
|
0 |
61095 |
63710 |
|
59780 |
|
66570 |
103621 |
10530 |
|
atpHf |
TTGACCAACTCCAGGTCCAA |
14016 |
13424 |
|
32122 |
14890 |
117904 |
13822 |
18097 |
12647 |
|
52689 |
20716 |
76324 |
|
ycf3-3f |
CCCTGTHGAATSGCYTGTTCTCC |
44366 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rpl36 Saltonstall |
ATTCTACGTGCACTCTTCCG |
81877 |
|
|
75741 |
0 |
0 |
82110 |
|
|
|
0 |
77586 |
0 |
|
psaI Saltonstall |
CTAAGCCTACTAAAGGYACG |
|
59298 |
|
57270 |
0 |
59464 |
|
|
58135 |
|
0 |
59241 |
0 |
|
atpIr |
CCGCAGCTTATATAGGCGAA |
15297 |
|
|
|
16120 |
14833 |
15079 |
|
13463 |
|
51553 |
|
0 |
|
rps4 Saltonstall |
TCSTATTCCTGCAGTACAGG |
|
|
|
44392 |
0 |
0 |
|
|
|
|
0 |
46744 |
0 |
|
rps16F Saltonstall |
GTTGCTTTCTACCACATCG |
6172 |
6149 |
|
5514 |
6201 |
6024 |
6099 |
|
5767 |
|
134564 |
5565 |
0 |
|
ccmp10R |
TTCGTCGDCGTAGTAAATAG |
155864 |
154293 |
|
|
89087 |
0 |
156536 |
|
150498 |
|
0 |
|
41388 |
|
trnET-R |
CRAAATTMAYTTWATTKATACATGTAC |
32956 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rpoB Saltonstall |
TTCTMGGGAACTCCACATACG |
|
|
|
19092 |
0 |
0 |
|
|
|
|
0 |
21346 |
0 |
|
ccmp1r |
CCGAAGTCAAAAGAGCGATT |
3905 |
3822 |
|
|
3991 |
3778 |
3862 |
|
3550 |
|
3638 |
3453 |
120131 |
|
ccmp2f |
GATCCCGGACGTAATCCTG |
8476 |
7661 |
|
7686 |
8698 |
8009 |
8396 |
23029 |
7265 |
7774 |
58842 |
7853 |
70789 |
|
psbM Saltonstall |
CTTAAATGAAAGGRTCYGGTTGG |
|
|
|
16852 |
0 |
0 |
|
|
|
|
0 |
18346 |
0 |
|
ycf3-3r |
GCRGARGCTTGGTTYGATCAAGC |
44352 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ccmp3f |
CAGACCAAAAGCTGACATAG |
10037 |
|
|
|
10402 |
9735 |
9820 |
|
8709 |
|
56962 |
13412 |
0 |
|
ycf4-f2 |
GGGGATTYCCKGGAAWAARHCGTC |
62957 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ycf4-f3 |
TTCTTGCGYGTAYCMATKGAAG |
63163 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps8-f Grivet |
TGAACAATATTTTCGGTAAT |
82897 |
|
|
76999 |
|
|
83145 |
|
|
32175 |
|
78789 |
|
|
ccmp10-f |
TTTTTTTTTAGTGAACGTGTCA |
86660 |
|
|
|
88985 |
0 |
|
|
|
|
0 |
|
41601 |
|
NTCP12-r |
CCTCCATCATCTCTTCCAA |
16892 |
|
|
|
17704 |
16440 |
|
|
|
|
49964 |
|
79049 |
|
ycf9-P |
TTGCYTCTCCYGATGGYTGG |
37619 |
|
|
|
|
|
|
|
|
|
|
|
|
|
matKf2 |
CTATTTAAACCATGATCATGAG |
3543 |
3455 |
|
|
3621 |
0 |
3482 |
|
3185 |
3147 |
3284 |
|
0 |
|
ndhF-52 |
AGGTAAGATCCGGTGAATCGGAAAC |
114344 |
|
|
|
|
|
115091 |
|
|
|
|
107375 |
|
|
ndhF-f1 |
AAGAAGAGATGCGTCCGCCCCCTA |
112141 |
110472 |
|
|
115652 |
0 |
112888 |
|
|
|
115147 |
|
0 |
|
ndhF-r1 |
GGATCATACCTTTCATTCCACTTCC |
114267 |
112613 |
|
|
117802 |
123439 |
115014 |
|
109973 |
|
117291 |
46387 |
2399 |
|
rps4-3' |
ATATTCTACGACTAGCAATTC |
47554 |
45241 |
|
45057 |
49353 |
0 |
47224 |
|
29338 |
|
19366 |
|
0 |
|
rps3 Campagna Downie |
TTTCCTTTCGAAAAGCAATG |
85483 |
83067 |
|
|
0 |
82696 |
85730 |
15020 |
81495 |
|
0 |
81354 |
0 |
|
NTCP11-f |
AGTGAATATTCATTGAGACGAACG |
15006 |
13196 |
|
|
79249 |
0 |
14789 |
|
|
|
0 |
|
0 |
|
matK-5r |
GGATCCTTTCATGCATT |
2837 |
|
|
|
2933 |
2719 |
|
|
|
|
37270 |
|
0 |
|
NTCP12-f |
CCTCCATCATCTCTTCCAA |
16892 |
15678 |
|
|
17704 |
16440 |
16674 |
|
15036 |
15922 |
49964 |
|
79049 |
|
JSB-r1 |
TAGGGGGCGGACGCATCTCTTCTT |
112164 |
110495 |
|
|
115675 |
0 |
112911 |
|
|
|
115170 |
|
0 |
|
NTCP14-f |
AATCCGTAGCCAGAAAAATAAA |
31580 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps2-rs2R |
TGAACTCCTGCCTCCATCATCT |
16882 |
|
|
|
|
|
16664 |
|
|
|
|
|
|
|
atpA-f1 |
CCACTCTGGAAACGGAGATACCC |
11047 |
|
|
35311 |
11719 |
0 |
10815 |
|
|
|
0 |
37672 |
73176 |
|
rps2-rs1R |
TGACACCGGGCCCTTATTGCAG |
16657 |
|
|
29820 |
17469 |
16205 |
16439 |
|
14801 |
|
0 |
|
0 |
|
rps2-f |
CAAAAACTAAATCACAAGCTTCTG |
16751 |
15537 |
|
28137 |
17563 |
0 |
16533 |
16241 |
14895 |
15781 |
50105 |
32044 |
0 |
|
NTCP37-ff |
TTCCGAGGTGTGAAGTGG |
132770 |
130458 |
|
116347 |
113080 |
107232 |
133404 |
|
128254 |
|
113913 |
102617 |
20228 |
|
rps2-4C |
TGGAAGAGATGATGGGGGC |
16909 |
15695 |
|
75524 |
17721 |
16457 |
16691 |
28136 |
15053 |
15939 |
49947 |
|
79066 |
|
rps2-1 |
TCCCTCACAAATAGCGAATACCAA |
16254 |
15040 |
|
30221 |
17066 |
0 |
16036 |
16730 |
6341 |
15939 |
50602 |
|
4655 |
|
NTCP11-r |
ATCTAGAGTGATAGCAAAAA |
15139 |
|
|
|
|
|
14922 |
|
|
|
|
|
|
|
clpP pr1 |
ATCYTCKRYACTSAMATATACCATSAGACC |
73527 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ccmp4-R |
CCAAAATATTBGGAGGACTCT |
12808 |
|
|
|
|
|
|
|
|
|
|
|
|
|
rps7-5R |
GAAAGCCAATGATTTTTTTCC |
|
|
|
|
|
|
|
|
|
66733 |
|
|
|
|
ccSSR-21 F |
CCACCCCGTCTCSACTGGATCT |
109977 |
108302 |
|
98892 |
0 |
107360 |
110274 |
|
|
|
0 |
102740 |
0 |
|
atpA-r1 |
CCCTTTTGAAAGAAGCTATTCAGG |
10459 |
|
|
|
11356 |
10325 |
|
|
|
|
56175 |
38035 |
72813 |
|
rps4-5' |
ATGTCSCGTTAYCGAGGACCT |
48141 |
|
|
|
|
|
|
|
|
|
|
|
|
|
ccSSR-20 F |
CCGCARATATTGGAAAAACWACAA |
118974 |
117116 |
|
|
|
|
|
|
|
|
|
|
|
|
ccmp7-f |
CAACATATACCACTGTCAAG |
57284 |
|
|
|
|
|
56940 |
|
53511 |
|
|
|
|
|
ccmp8-r |
TTCTTTCTTATTTCGCAGTGAA |
71612 |
80260 |
|
|
0 |
0 |
71869 |
|
|
|
75073 |
38304 |
0 |
|
ccmp9-f |
GGATTTGTACATATAGGACA |
74011 |
71312 |
|
|
76245 |
71272 |
74245 |
|
|
|
0 |
|
0 |
|
matK-7Br |
GTATTAGGGCATCCCATT |
2500 |
2427 |
|
|
2596 |
0 |
2439 |
|
2154 |
|
0 |
|
121533 |
|
CLPP Goulding |
AAGATCCGCCCGATTTG |
73995 |
|
|
|
|
|
74229 |
|
|
|
|
|
|
|
ycf4-r2 |
AGACCCCGTTATAAGWTCTATCC |
62685 |
59819 |
|
|
|
59949 |
62352 |
|
|
|
|
|
|
|
ccSSR-16 R |
CCTGGCCCAACCCTAGACA |
105083 |
103355 |
|
93872 |
108239 |
102410 |
105402 |
|
100292 |
|
109122 |
97726 |
0 |
|
clpP1-f |
YCCAADHYGMWYYWTCHTCTCCRGG |
74447 |
|
|
|
|
|
|
|
|
|
|
|
|
|
clpP1-r |
CCYGGAGADGASRRSDCRDHTTGG |
74471 |
|
|
|
|
|
|
|
|
|
|
|
|
|
clpP-5'ex2r |
TCYTCWATACTAAGATATAC |
74110 |
|
|
|
|
|
|
|
|
|
64483 |
|
|
|
clpP-f |
ATAAWAAGAACTAGCAGGTT |
72665 |
|
|
67890 |
61857 |
0 |
72922 |
67343 |
84084 |
30009 |
0 |
69806 |
0 |
|
clpP-r |
AACCTGCTAGTTCTTWTTAT |
72684 |
|
|
67909 |
61876 |
0 |
72941 |
67362 |
84070 |
29990 |
0 |
69825 |
0 |
|
ccSSR-13 R |
TAGTCATTAGTAAAGCCGARGTSA |
86127 |
83714 |
|
|
88430 |
83345 |
86374 |
|
82219 |
|
88877 |
|
0 |
|
ccmp9-r |
CTCAACTCTAAGAAATACTTG |
74108 |
|
|
|
0 |
0 |
|
|
|
|
0 |
17002 |
0 |
|
trnHf |
ACGGGAATTGAACCCGCGCA |
14 |
12 |
12 |
81116 |
14 |
9 |
15 |
29661 |
9 |
50021 |
16 |
82866 |
124019 |
|
ccSSR-23 R |
TCAATTCCCGTCGTTCGCC |
24 |
22 |
22 |
81106 |
24 |
84131 |
25 |
29651 |
19 |
50011 |
26 |
82856 |
124009 |
|
trnH(GUG) Tate |
CGCGCATGGTGGATTCACAATCC |
28 |
30 |
26 |
81102 |
28 |
84127 |
29 |
|
23 |
50007 |
0 |
82852 |
124005 |
|
trnHM |
GTGAATCCACCAYGCGCGGG |
45 |
|
43 |
81085 |
45 |
40 |
46 |
|
|
49990 |
0 |
82835 |
123988 |
|
trnH(GUG) Saltonstall |
ACTGCCTTGATCCACTTGGC |
51 |
48 |
49 |
81079 |
51 |
84104 |
52 |
29624 |
46 |
|
53 |
82829 |
123982 |
|
trnH(GUG) Hamilton |
ACTGCCTTGATCCACTTGGC |
51 |
48 |
49 |
81079 |
51 |
46 |
52 |
29624 |
46 |
|
53 |
82829 |
123982 |
|
NTCP40-r |
GATGTAGCCAAGTGGATCA |
76 |
73 |
74 |
81054 |
76 |
84079 |
77 |
29599 |
71 |
49959 |
78 |
82804 |
123957 |
|
TRNH Goulding |
CGGATGTAGCCAAGTGGATC |
78 |
75 |
76 |
81052 |
78 |
84077 |
79 |
29597 |
73 |
49957 |
80 |
82802 |
123955 |
|
psbA Hamilton |
CGAAGCTCCATCTACAAATGG |
558 |
403 |
342 |
425 |
613 |
488 |
518 |
|
240 |
|
391 |
|
0 |
|
psbA-5' |
TACGTTCRTGCATAACTTCC |
593 |
442 |
377 |
|
648 |
0 |
553 |
29370 |
276 |
65723 |
426 |
|
123493 |
|
psbA Saltonstall |
CGTAATGCTCACAACTTCCC |
596 |
445 |
380 |
144 |
651 |
526 |
556 |
29367 |
279 |
65720 |
0 |
151 |
123490 |
|
psbA Sang |
GTTATGCATGAACGTAATGCTC |
608 |
457 |
392 |
156 |
114346 |
538 |
568 |
29355 |
291 |
65708 |
0 |
163 |
123478 |
|
psbAr1 |
GTAGTAGGTATCTGGTTTACCGCT |
758 |
607 |
542 |
|
813 |
688 |
718 |
|
441 |
139 |
591 |
72663 |
123328 |
|
psbAr2 |
CTTCTTCCTAGCTGCTTGGCCTGT |
780 |
|
563 |
328 |
835 |
710 |
740 |
|
463 |
161 |
613 |
335 |
123306 |
|
psbAf1 |
AACCATTCATCAACGGATGCCGC |
1279 |
1128 |
1063 |
|
1334 |
1209 |
1239 |
28684 |
|
723 |
1112 |
834 |
122807 |
|
psbAf2 |
GTAGGAATAATGGCACCGGA |
1342 |
1191 |
1126 |
890 |
1397 |
1272 |
1302 |
28621 |
1025 |
|
1175 |
897 |
122744 |
|
psbA59R |
AACCATCCAATGTAAAGACGGTTT |
1498 |
1347 |
1282 |
1046 |
1553 |
1428 |
1458 |
28465 |
1181 |
879 |
1331 |
1053 |
122588 |
|
psbA-3' |
CTAGCACTGAAAACCGTCTT |
1531 |
1380 |
1315 |
1079 |
1584 |
0 |
1491 |
28432 |
1214 |
912 |
1362 |
1084 |
122557 |