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植物叶绿体基因组基因引物序列(六)

发布者:Primerbank 时间:2018-01-30 浏览量:1254


primer name

sequence

Nicotiana

Arabidopsis

Populus

Oryza

Eucalyptus

Acorus

Atropa

Marchantia

Spinacia

Pinus

Oenothera 2

Zea 2

Medicago 2

ccSSR-12 F

CCAAAAACTTGGAGATCCAACTAC

76437

73855

74818

70283

78691

73688

76667

 

72531

53908

78825

72190

52414

psbB-B68R

GTAGTTGGATCTCCAAGTTTTTGG

76460

73878

74841

70306

78714

73711

76690

 

72554

53931

78848

72213

52391

psbB2-r (B1B2-B2)

CYTGTCTTYTTGTAGTTGGAT

76470

73889

74852

 

78725

73722

76701

 

72565

 

78859

72224

52380

ccSSR-12 R

TTCCATAGATTCGATCGTGGTTTA

76685

74087

75063

70495

78853

73911

76919

 

72748

 

79047

72406

52227

psbT-68R

AAYGTATAAACCAATGCTTCCAT

76702

74104

75080

70512

78870

73928

76936

70691

72765

54052

79064

72423

52210

psbN-70R

TATCTGGTTTACTTGTAAGYTTTACTGG

76958

74349

75326

70746

79121

74173

77192

 

73010

54318

79305

72655

51958

psbF Hamilton

CGCAGTTCGTCTTGGACCAG

77154

 

75529

 

79310

74370

77387

 

 

 

0

 

51771

psbH-B71R

CCAGGAGCTACTTTACCATATTC

77207

77491

75585

70987

79363

74423

77441

 

73250

54535

79549

 

51718

petB-f

TGGGGAACTACTCCTTTGAT

77209

 

75587

70989

79365

74425

77443

71200

73252

54537

79551

72898

51716

psbH-71R

CCCATMAAAGGAGTAGTYCCCC

77231

 

75609

71011

79387

74447

77465

 

73274

 

0

72920

0

petB3-r

GRTCCCAAGGGAARGAATAACCAGT

78628

 

77068

72466

80811

75865

78868

 

74696

77069

0

74319

0

petB-r

CCCGAAATACCTTGCTTACG

78842

76282

77282

72680

81025

76079

79082

72556

74910

 

81203

74533

50096

rpl16-f (A)

AAAGATCTAGATTTCGTAAAC

84062

81583

78173

78126

0

0

 

9710

 

 

86700

79916

0

petD-r (BD-D)

CAAAYGGATAYGCAGGTTCACC

79992

77397

78521

 

 

 

 

73415

 

 

 

 

 

NTCP33-f

TGGCTGTTATTCAAAAGGTC

80561

77977

79060

 

82795

0

80794

 

76557

47827

82980

112244

110953

NTCP33-r

CATGATAAATTGGCTAAACTCA

80709

 

79208

 

82040

0

80942

 

 

 

82210

 

49125

petD-f

TCCAGTAGTAATTCTAGGTA

79904

 

80144

73747

82117

77125

80144

 

 

57279

82287

75589

49046

rps8 Saltonstall

CGAGGTATAATGACAGATCGAG

82673

80139

81236

76769

84965

79938

82921

75844

78753

 

85127

78559

46061

rps8-r Grivet

TCAAATACTTTTACGAGAAG

82899

80365

81462

 

85190

49508

83147

 

78977

60300

85364

 

45836

NTCP34-f

GATCCATATCAGCATTTCGTAT

82949

80415

81512

 

85241

0

83197

 

79029

 

0

69357

0

rpl16-R1661

CGTACCCATATTTTTCCACCACGAC

83876

81397

82523

77940

86194

81156

84124

 

79945

61252

86514

79730

44340

rpl16-R1516

CCCTTCATTCTTCCTCTATGTTG

84020

 

82670

78084

86338

81300

84268

 

80089

61396

86658

79874

44196

rpl16-f

TGTTTACGAAATCTGGTTCT

84041

81562

82688

78105

86359

81321

84289

 

 

61417

86679

79895

44175

rpl16ex1-f

CAACGGAGTCACACACTAAGCATAGC

85073

82630

83815

79176

87365

82272

85320

77663

81076

62257

87795

80948

43103

rp116 F71 Small

GCTATGCTTAGTGTGTGACTCGTTG

85098

82655

83840

79201

87390

82297

85345

77688

81101

62282

87820

80974

43078

rpl16-F71

TTGCTATGCTTAGTGTGTGACTC

85100

82657

83842

79203

87392

82299

85347

77690

81103

62284

87822

80976

43076

rps3-f1

ATATCCAAATTTTGATGCCC

85259

82843

84043

79361

87559

82472

85506

21814

81271

0

88003

81130

85285

ccSSR-13 F

AGTCTGAAACCRAGKGGATTTATT

85864

83448

84648

80029

88164

83077

86111

 

 

 

88611

81753

42332

rps3-f2

CCCAGTCTGAAACCAAGTGG

85861

83448

84648

80029

88163

83074

86108

78362

81876

62994

 

81750

42335

rps3-r2

CCACTTGGTTTCAGACTGGG

85880

83464

84664

80045

88180

83093

86127

78378

81892

63010

 

81769

42316

rpl22-r1

ATAGTGGGGGATTATGGGAC

85911

0

84695

0

88211

 

86158

0

0

0

 

 

 

rpl22-f1

GCAGACATAGATATATGTTCACC

86292

83879

85113

0

88595

83510

86539

105537

82384

0

 

 

 

rps19-r1

TGATAATAAATCTCGTCGTTAA

86424

84026

85370

80657

88750

83651

86670

0

82605

63492

89242

82409

 

rps19-r2

TTAGGAGAATTTGCACCTAC

86472

84073

85417

0

 

 

86718

78890

82653

63539

89289

 

 

ccSSR-14 F

GGGTATAATGGTAGATGCCC

86557

84158

85502

 

88882

83783

86803

 

82738

 

0

 

41704

rps19-f1

GGGTATAATGGTAGATGCCC

86557

84158

85502

 

88883

83783

86803

0

82738

0

 

 

41703

rps19-r3

GGGCATCTACCATTATACCC

86576

84177

85521

0

88901

83802

86822

0

82757

0

 

 

41685

NTCP36-r

TTGTAGCCAATCATTTATTAA

86654

 

85599

 

88979

83880

86900

79072

82835

 

0

 

41607

IRB01F

GGATTTTTTTTTAGTGAACGTGTCAC

86657

84258

85602

 

88982

267

86903

 

82838

 

0

 

41604

NTCP36-f

GTAGTAAATAGGAGAGAAAATAGA

86753

84347

85699

76552

89078

0

87012

 

82938

 

38380

 

41404

ccSSR-14 R

GCCGTAGTAAATAGGAGAGAAA

86756

84350

85702

 

89081

0

87015

 

82941

 

0

 

41394

ccmp10-r

TTCGTCGDCGTAGTAAATAG

86762

84356

85708

 

89087

0

87021

 

82947

 

0

 

41388

NTCP40-f

TAATTTGATTCTTCGTCGC

86773

84367

85719

 

89098

84208

87032

 

 

 

89599

82957

41377

RPL2 Goulding

GATAATTTGATTCTTCGTCGCC

86775

84369

85721

81209

89100

84210

87034

 

 

 

89601

82959

41375

rpl2-25R

TTCCAAGYGCAGGATAACCCCA

86805

84399

85751

81239

89130

0

87064

 

82990

 

0

82989

41345

rpl2-B25R

GGGTTCATARCTACTCCTCTTAC

86894

84488

85840

 

89219

84329

87153

 

83079

63947

0

 

41256

rpl2-3'

AGCCAACGCTTAGATCCGGCTCTACC

86933

84527

85879

81367

89258

84368

87192

 

83118

 

89759

83117

0

rpl2-24R

GTGCCTAAGGGCATATYGGTG

87158

84752

86104

81592

89483

84593

87417

 

83343

64211

89984

83342

40992

rpl2f

ACCGATATGCCCTTAGGCACGGC

87177

84771

86123

81611

89502

84612

87436

 

83362

64230

90003

83361

0

rpl2-24F

CAACRATATGCCCTTAGGCAC

87178

84772

86124

81612

89503

84613

87437

 

83358

6431

90004

83362

40972

IRB02F

CATCTGGCTTATGTTCTTCATGTAGC

87397

85006

86345

81833

89721

84831

87654

79715

 

64418

90219

83583

40728

rpl2-23F

GCTACATGAAGAACATAAGCCAGATG

87422

85031

86370

81858

89746

84856

87679

79740

 

64443

90244

83608

40703

IRB01R

AAGTATCGACGTAATTTCATAGAGTC

87461

85070

86409

81897

89785

84895

87718

 

 

 

90283

83647

40664

rpl2-22R

GTCTTCTCCATATTACYATATCT

154989

85246

86585

82068

89960

85075

 

 

 

64695

90458

83818

40481

rpl2-21F

CCCTACCTTTGAGTGCGGTTTGAA

87854

85464

86802

82285

90177

85292

88111

80129

 

64912

90676

84035

40264

rpl2m1

TTCTATGGTTACGATTCTACCATATATGTC

87994

85604

86942

82425

90317

85432

88251

 

83513

 

0

84175

40124

rpl23-m1

TTCTATGGTTACGATTCTACCAGATATGTC

87994

85604

86942

82425

90317

85432

88251

0

0

0

90816

84175

 

rpl2-r

CCATAGAATACGACCCTAAT

88001

85611

86949

82432

90324

85439

88258

 

83520

65059

90823

84182

40117

rpl2-B20F

GTAACCATAGAATACGACCC

88005

85615

86953

82436

90328

85443

88262

 

83524

65063

90827

84186

40113

ccSSR-15 F

GCTTATGACCTCCCCCTCTATGC

88062

85672

87010

82493

90385

85500

88319

 

83581

 

90884

84243

40056

rpl2-5'

GGAGGTCATAAGCGTCTATACCG

88074

85684

87022

82505

90397

85512

88331

 

83593

 

90896

84255

40044

IRB03F

ATACGTCTGTAATGCATTGTATGTCC

88310

85920

87258

82741

90639

85748

88567

 

83823

 

91132

58781

0

ccSSR-15 R

TGCATTACAGACGTATGATCATTA

88325

85935

87273

55874

90654

85763

88582

 

83838

 

91147

58766

39828

rpl23p46

TAAGACAGAAATAAAGCATTGCGTCGAAC

88441

86051

87389

82872

90770

85879

88698

 

83940

43540

91263

58651

39718

IRB02R

CAACTAGGACAGAAATAAAGCATTGG

88445

86055

87393

82874

90774

85883

88702

 

83944

 

91267

58647

39708

trnIf

TGAATGGTTAAAGCGCCCAACT

88761

86374

87709

83201

91094

0

89018

81046

84260

66000

91610

84943

39084

IRB04F

AAGAAAAAATCTCTATTTGATAGGGC

89181

86770

88111

 

91490

86719

89414

 

84656

 

12790

19434

35656

IRB03R

GAAGATACAGGAGCGAAACAATCAAC

89311

86900

88241

 

91620

86849

89544

 

 

 

92135

 

38436

IRB05F

GGATTCCATTAGTAATGAGGATTCGG

90096

87685

89026

 

92405

87247

90329

 

 

 

0

115523

28600

IRB04R

TTTCGTTCCGTTTGAAGAAAGGAAGG

90212

87807

89141

 

92521

87363

90445

 

85385

 

92997

 

107395

IRB06F

CTTCGAATATGGAATTCAAAGGGATC

91131

88729

90070

 

93440

88264

91364

 

86186

 

93856

 

37735

IRB05R

GAGGCTCGAACCATTTCTTCTGACTC

91258

88856

90197

 

93567

88387

91491

 

86313

 

0

103860

37608

IRB07F

ACAATTCCTCAATATCTTGTTCATTC

92049

89680

90994

 

94358

89167

92306

 

87107

 

94714

55424

0

IRB06R

TGAATATGTTAGATACCTGTGACTCG

92173

89810

91118

 

94482

89270

92430

 

87230

116228

94838

 

0

IRB08F

GAAAAGGTCAAATCTTTGATGATTCC

92995

90623

91937

 

95304

90116

93261

 

88005

 

95840

30208

36006

IRB07R

TCTTCTAGAGAATCTCCTAATTGTTC

93140

90768

92082

 

95449

45905

93406

 

88150

 

95985

 

35861

IRB09F

CTGAACAAGTTCCTGGATAACAAGCC

93853

91493

92804

 

96171

0

94119

 

88887

 

96698

 

35145

IRB08R

TTTCCGGCATCATATCCATAGTTAGC

94036

91658

92972

 

96336

91040

94302

 

89019

 

96881

 

0

IRB10F

GATCTAGTTCATGGCCTATTAGAAGT

94849

92471

93785

 

97149

91859

95115

 

89832

 

97706

86077

34086

IRB09R

AAATCTCTGATCAAGGATAGAACAAG

95022

92644

93958

 

97322

111906

95288

 

89999

 

97879

 

33922

IRB11F

CGGATGAAATGAAAATTGGATTCATG

95669

93330

94644

 

98008

92592

95965

 

90679

 

98556

87005

0

3'rps12-15R (trnL)

GAGATTTTGAGTCTCGCGTGTC

96469

94315

95753

84750

99024

93241

96735

3714

91703

111974

99621

88623

32869

IRB12F

CCAATTGCTTCGATTTGAATTATCCG

96626

94483

95923

84965

99194

93411

96892

 

91868

 

99793

88794

32700

IRB11R

AATCGGACCTGCTTTTTACATATCTC

96764

96089

96089

85118

0

0

97030

 

 

 

0

88959

32552

ndhB-14R

GGTATAGTAGATGCTATCACACA

97102

94999

96426

85447

99700

93898

97368

 

92347

 

0

89288

32341

IRB13F

ATTCCAATAATTACATATCCGATTTG

97567

95464

96891

85912

100165

94363

97833

 

92812

 

100774

89753

31876

ndhB-13R

GCATACGTTTCATGCTTGTTTGAG

97613

95510

96937

85958

100211

94409

97879

 

92858

 

100820

89799

31830

ndhB-13F

CTCAAACAAGCATGAAACGATGC

97636

95533

96960

85981

100234

94432

97902

 

92881

 

100843

89822

31807

IRB12R

TGGAAATCCTAGCTATTCTTAGCATG

97687

95584

97011

86032

100285

94483

97953

 

92932

 

100894

89873

31756

ndhB-12F

CTTTCTGTTACTTCGAAAGTAGC

97781

95678

97105

86126

100379

94577

98047

2800

93026

 

100988

89967

31662

ndhB-11R

CCTTAACTTTTCGAGGAATCCTTC

97987

95885

97311

86344

100585

94783

98253

 

93233

 

101196

90185

31447

ndhB-11F

GAAGGATTCCTCGAAAAGTTAAGG

98010

95908

97334

86367

100608

94806

95908

 

93256

 

101219

90208

31424

ndhB-C11R

TTACACTCGTAGTCTCTGAAG

98170

96069

97497

86527

100772

94966

98436

 

93416

 

101380

90368

31257

ndhB-10R

CCTTCGTAGACGTCAGGAGTCCATTG

98486

96389

97813

86864

101088

95303

98752

 

93726

 

101695

90697

30942

IRB14F

TACGTCAGGAGTCCATTGATGAGAAG

98494

96397

97821

86872

101096

95311

98760

 

93734

 

101703

90705

30934

ndhB-B10R

GAAAGCTTGAACCCAATTCCTAC

98528

96431

97855

86906

101130

95345

98794

 

93768

 

101737

90739

30900

IRB13R

CTTATCAATACACAAATGTATAACTC

98610

96513

97937

86988

101212

95427

98876

 

96891

111478

101819

90821

30818

ndhB-9F

ATGGTTTCTCTTGGCTATATGG

98675

96578

98002

87053

101277

95492

98941

 

93915

 

101884

90886

30753

ndhB-8R

GATAGAGGAATACATAGAGTTGAAC

98918

96821

98245

87296

101520

95735

99184

 

94158

 

102127

91129

30510

ndhB-7R

CATTCTGGGAAAATSAAACTTCC

99155

97058

98482

87533

101757

95972

99421

 

 

 

102364

91366

0

ndhB-7F

GGAAGTTTSTTTCCCAGAATG

99175

97069

98502

45287

101777

95992

99441

 

60077

 

0

47634

0

ndhB 7R

CATTCTGGGAAAATSAAACTTCC

99155

97078

98502

87533

101757

95972

99421

 

60057

 

102364

91366

0

IRB15F

GTGCAAAAGCTCTATTTGCCTCTGCC

99551

97489

98931

87955

102200

96407

99824

1344

94804

111010

102807

91783

29922

rps7-6R

CTATTTGCCTCTGCCATTCTATGAG

99562

97500

98942

87966

102211

96418

99835

 

94815

110999

102818

91794

29911

rps7-6F

CTCATAGAATGGCAGAGGCAAATAG

99586

97524

98966

87990

102235

96442

99859

 

94839

110975

102842

91818

29887

IRB14R

AATATGGCTTTCAAATTAAGTTCCGA

99665

97603

99045

88069

102314

96521

99938

 

94918

 

102921

91897

29808

IRB16F

TCCTCGAACAATGTGATATCTCACAC

100699

98608

100054

89088

103328

97524

100941

 

95922

109892

103947

92916

29335

IRB15R

TCACTGCTTATATACCCGGTATTGGC

100781

98720

100166

89200

103440

97636

101053

 

96034

109780

104059

93028

29223

IRB17F

GTGTGAGCTTATCCATGCGGTTATGC

101556

99576

100971

89848

104264

98440

101824

 

96499

109270

104854

93669

28806

IRB16R

CAACATAGGTCATCGAAAGGATCTCG

101667

99687

101082

89954

104375

98556

101935

 

96610

109152

104965

93775

28694

IRB18F

AAGTCATCAGTTCGAGCCTGATTATC

102504

100751

102142

91038

105424

99582

102803

81856

97690

108280

105818

94901

56176

IRB17R

GCTTCATATTCGCCCGGAGTTCGCTC

102670

100921

102311

 

105590

99748

102969

 

97856

 

0

29204

0